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Defining and benchmarking open problems in single-cell analysis

Luecken, Malte D.
; 
Gigante, Scott
; 
Burkhardt, Daniel B.
; 
Cannoodt, Robrecht
; 
Strobl, Daniel C.
; 
Markov, Nikolay S.
; 
Zappia, Luke
; 
Palla, Giovanni
; 
Lewis, Wesley
; 
Dimitrov, Daniel
... show 10 more
Author
Luecken, Malte D.
Gigante, Scott
Burkhardt, Daniel B.
Cannoodt, Robrecht
Strobl, Daniel C.
Markov, Nikolay S.
Zappia, Luke
Palla, Giovanni
Lewis, Wesley
Dimitrov, Daniel
Vinyard, Michael E.
Magruder, D.S.
Mueller, Michaela F.
Andersson, Alma
Dann, Emma
Qin, Qian
Otto, Dominik J.
Klein, Michal
Botvinnik, Olga Borisovna
Deconinck, Louise
Waldrant, Kai
Yasa, Sai Nirmayi
Szałata, Artur
Benz, Andrew
Li, Zhijian
Xu, Chenling
Xing, Galen
Tong, Alexander
Svensson, Valentine
Sarkar, Hirak
Righelli, Dario
Lopez, Romain
Lombardo, Maximilian G.
La Manno, Gioele
Kleshchevnikov, Vitalii
Ji, Yuge
Hicks, Stephanie
Gayoso, Adam
Floc’hlay, Swann
Ergen, Can
DeMeo, Benjamin
Chen, Ann T.
Bravo González-Blas, Carmen
da Veiga Beltrame, Eduardo
Ahlmann-Eltze, Constantin
Rieck, Bastian
Bloom, Jonathan M.
Pisco, Angela Oliveira
Saez-Rodriguez, Julio
Wulsin, Drausin
Pinello, Luca
Saeys, Yvan
Theis, Fabian J.
Krishnaswamy, Smita
Supervisor
Department
Computational Biology
Embargo End Date
Type
Letter
Date
2025
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Language
English
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Abstract
[No abstract available]
Citation
M. D. Luecken et al., “Defining and benchmarking open problems in single-cell analysis,” Nature Biotechnology 2025 43:7, vol. 43, no. 7, pp. 1035–1040, Jul. 2025, doi: 10.1038/s41587-025-02694-w
Source
Nature Biotechnology
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Publisher
Springer Nature
DOI
10.1038/s41587-025-02694-w
Additional links
https://www.nature.com/articles/s41587-025-02694-w
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